ABOUT THIS RECORDspecies: Petunia axillaris subsp. axillaris
miRNA family: MIR482
source: miRNEST
Taxonomy by NCBI:
Petunia axillaris subsp. axillaris Petunia axillaris Petunia Petunioideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTTGCCTACTCCTCCCATGT miRNA* ATGAGTGGGGGTGGAAAGATA mismatches: 4 bulges: 2 |
pre-miRNA
GTAGGAAGTGGAAAGGGGTGAGGATTATGCGAAGCTTTTGGCATGAGTGGGGGTGGAAAGATATCTTTTTATGTGTTCATAAATTAATTGAAATCTTGCC
TACTCCTCCCATGTCCATGGTTTCGGGTCATTTCTCCCTTTCCTCATACTACT
dot-bracket secondary structure
((((.....(((((((((.(((((((...(((((((..(((((((...((((((((.(((((.((..((((((....))))))......)).)))))..)
)))))))..)))).))).))))))))))).))).))))))))).....)))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTAGGAAGTGGAAAGGGGTGAGGATTATGCGAAGCTTTTGGCATGAGTGGGGGTGGAAAGATATCTTTTTATGTGTTCATAAATTAATTGAAATCTTGCC
TACTCCTCCCATGTCCATGGTTTCGGGTCATTTCTCCCTTTCCTCATACTACT
dot-bracket secondary structure
((((.....(((((((((.(((((((...(((((((..(((((((...((((((((.(((((.((..((((((....))))))......)).)))))..)
)))))))..)))).))).))))))))))).))).))))))))).....)))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
